BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F12SP1|AL429265
(950 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1828 0.0
>3x_Contig1581
Length = 11429
Score = 1828 bits (920), Expect = 0.0
Identities = 942/950 (99%), Gaps = 1/950 (0%)
Strand = Plus / Minus
Query: 1 gatcctaattattcaacgggttctttgagatatcgtagatatgatggatgtgcttaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gatcctaattattcaacgggttctttgagatatcgtagatatgatggatgtgcttaattc 1266
Query: 61 ttcaatcgaaacgttaataccattctgtagttcaatactgatgagatgagcttgtcgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ttcaatcgaaacgttaataccattctgtagttcaatactgatgagatgagcttgtcgaaa 1206
Query: 121 atttttcaatgttagttaaatttcaaaaagaaatgaaaagaaaacacatctggacaccac 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1205 atttttcaatgttagttaaatttcaaaaagaaatgaaaagaaa-cacatctggacaccac 1147
Query: 181 atatataaatcacgtgttataaagggaccagataaagaactgcactgtttgttcttcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 atatataaatcacgtgttataaagggaccagataaagaactgcactgtttgttcttcata 1087
Query: 241 tatcgagaccaagcacattccaatggccaatacggttcacaaaagcatcaaactagacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tatcgagaccaagcacattccaatggccaatacggttcacaaaagcatcaaactagacgt 1027
Query: 301 tgtatattaaacaatatttgctggtagtttttaatttattcaagtctatacataaggtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 tgtatattaaacaatatttgctggtagtttttaatttattcaagtctatacataaggtga 967
Query: 361 gatgtagaatatatgtgccaaatcaattgacttgtatacaaaamatgtaggtgtgaaatg 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 966 gatgtagaatatatgtgccaaatcaattgacttgtatacaaaaaatgtaggtgtgaaatg 907
Query: 421 tgatcattaactgtcatttccycccgtctatcttaagttctccggttatagtcaaatatt 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tgatcattaactgtcatttcctcccgtctatcttaagttctccggttatagtcaaatatt 847
Query: 481 caaagggattgaatttcatatgcgatcattgaaagtggtacatcatcagtgaggaaggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 caaagggattgaatttcatatgcgatcattgaaagtggtacatcatcagtgaggaaggtt 787
Query: 541 ttgataaaagcctgctcagtgtaaaggtaagaggagggaacacgaaaagtaaaatacaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ttgataaaagcctgctcagtgtaaaggtaagaggagggaacacgaaaagtaaaatacaaa 727
Query: 601 ctaggtaatggtaaatggtgcctctacgcaccgctctcctcaattcttgaaaatgcggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ctaggtaatggtaaatggtgcctctacgcaccgctctcctcaattcttgaaaatgcggat 667
Query: 661 gacagccgtcatgaaaatggcggatagaactggaatagtgaagttatcatcccagttaaa 720
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gacagctgtcatgaaaatggcggatagaactggaatagtgaagttatcatcccagttaaa 607
Query: 721 caagtcgataccttcactcaaagctgcgacaaaaccacctaatagcgaaagttgtagtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 caagtcgataccttcactcaaagctgcgacaaaaccacctaatagcgaaagttgtagtag 547
Query: 781 gtttagtttgcttgtctcttcggtccaggagatttcacctggtttgttcacccagttata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtttagtttgcttgtctcttcggtccaggagatttcacctggtttgttcacccagttata 487
Query: 841 atgaggcacaaagaatccgtaaaatgagttacaagttatgagaccaacggaaaaggctgc 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 486 atgaggcacaaagaatccgtaaaatgagtaacaagttatgagaccaacggaaaaggctgc 427
Query: 901 catggaacctgctaaagacttatttctggccaattttggtgttaggkgtc 950
||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 426 aatggaacctgctaaagacttatttctggccaattttggtgtaaggtgtc 377
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8059
Number of Sequences: 1807
Number of extensions: 8059
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)